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RNAi Experiment: Cenix:171-c7 Ace View of Cenix:171-c7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y73B3A.12
Description of "Y73B3A.12"  Associated GO Term : calcium ion binding
KOG Annotation  Calmodulin and related proteins (EF-Hand superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:139099..139743)
Transcript overlap: 351 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 309
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.693
Wormbase (BLAST) RNAi primary
External "Y73B3A.12" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T21H3.3 (cmd-1)
Description of "T21H3.3"  cmd-1 encodes a putative homolog of calmodulin 1 that affects growth rate and fertility.
KOG Annotation  Calmodulin and related proteins (EF-Hand superfamily)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 137
Relative score: 0.443 (Best raw score= for Gene )
Specificity index: 0.307
Wormbase (BLAST) RNAi primary
External "T21H3.3" Links  Wormbase NCBI Phenobank 1
Cenix:171-c7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Chromosome Segregation (karyomeres) abnormal
External Movies 
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hosting these data.)
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Cenix:171-c7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:171-c7 (PCR_reagent)
Remark  early embryonic: Chromosome Segregation (karyomeres)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y73B3A.12 Browse using GBrowse
Gene Graph
Gene Plot of T21H3.3 Browse using GBrowse
Gene Graph