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RNAi Experiment: Cenix:171-e7 Ace View of Cenix:171-e7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y73B3B.1
Description of "Y73B3B.1"  Associated GO Term : iron ion binding
KOG Annotation  Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:209883..210500)
Transcript overlap: 411 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 390
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.586
Wormbase (BLAST) RNAi primary
External "Y73B3B.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y104H12BR.1
KOG Annotation  Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 276
Relative score: 0.708 (Best raw score= for Gene )
Specificity index: 0.414
Wormbase (BLAST) RNAi primary
External "Y104H12BR.1" Links  Wormbase NCBI Phenobank 1
Cenix:171-e7 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:171-e7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:171-e7 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y73B3B.1 Browse using GBrowse
Gene Graph
Gene Plot of Y104H12BR.1 Browse using GBrowse
Gene Graph