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RNAi Experiment: Cenix:179-b12 Ace View of Cenix:179-b12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK1193.1 (col-19)
Description of "ZK1193.1"  col-19 encodes a member of the collagen superfamily containing collagen triple helix repeats (20 copies) that is required for normal structure of the alae; expressed during the L2-to-dauer and L4-to-adult molts with strongest expression in adult animals.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:421482..422057)
Transcript overlap: 295 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 253
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "ZK1193.1" Links  Wormbase NCBI Phenobank 1
Cenix:179-b12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:179-b12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:179-b12 (PCR_reagent)
Remark  3/3 tests give wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK1193.1 Browse using GBrowse
Gene Graph