Link to F07B7.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K06C4.15geneMap Link to K06C4.15Link to K06C4.14RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F07B7.6geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:186-e2 Ace View of Cenix:186-e2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F07B7.6
Description of "F07B7.6"  Associated GO Term : aspartic-type endopeptidase activity
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:8843099..8843248)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 129
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "F07B7.6" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K06C4.15
Description of "K06C4.15"  Associated GO Term : aspartic-type endopeptidase activity
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:8885194..8885343)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 129
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "K06C4.15" Links  Wormbase NCBI Phenobank 1 2
Cenix:186-e2 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:186-e2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:186-e2 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F07B7.6 Browse using GBrowse
Gene Graph
Gene Plot of K06C4.15 Browse using GBrowse
Gene Graph