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RNAi Experiment: Cenix:194-c5 Ace View of Cenix:194-c5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y79H2A.1 (brp-1)
Description of "Y79H2A.1"  brp-1 encodes a glutamine-rich protein that is conserved in nematodes, but that has no known homologies or sequence motifs; BRP-1 is able to bypass the need for the S. cerevisiae mating pheromone MAP kinase cascade to activate the mating pheromone-responsive gene FUSl.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12024700..12024849)
Transcript overlap: 106 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 85
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y79H2A.1" Links  Wormbase NCBI Phenobank 1
Cenix:194-c5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:194-c5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:194-c5 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y79H2A.1 Browse using GBrowse
Gene Graph