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RNAi Experiment: Cenix:195-h8 Ace View of Cenix:195-h8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F25B3.4
Description of "F25B3.4"  Associated GO Term : hydrolase activity
KOG Annotation  Serine/threonine specific protein phosphatase PP1, catalytic subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (V:9568496..9568645)
Transcript overlap: 138 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 138
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.525
Wormbase (BLAST) RNAi primary
External "F25B3.4" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  ZK354.9
Description of "ZK354.9"  Associated GO Term : hydrolase activity
KOG Annotation  Serine/threonine specific protein phosphatase PP1, catalytic subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:5306866..5307015)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 125
Relative score: 0.906 (Best raw score= for Gene )
Specificity index: 0.475
Wormbase (BLAST) RNAi primary
External "ZK354.9" Links  Wormbase NCBI Phenobank 1 2
Cenix:195-h8 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:195-h8 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:195-h8 (PCR_reagent)
Remark  3/3 tests are wildtype
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK354.9 Browse using GBrowse
Gene Graph
Gene Plot of F25B3.4 Browse using GBrowse
Gene Graph