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RNAi Experiment: Cenix:196-b5 Ace View of Cenix:196-b5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F36H12.8
Description of "F36H12.8"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:5259131..5259280)
Transcript overlap: 145 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 124
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.541
Wormbase (BLAST) RNAi primary
External "F36H12.8" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  R13H9.5
Description of "R13H9.5"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:5066371..5066520)
Transcript overlap: 145 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 105
Relative score: 0.847 (Best raw score= for Gene )
Specificity index: 0.459
Wormbase (BLAST) RNAi primary
External "R13H9.5" Links  Wormbase NCBI Phenobank 1 2
Cenix:196-b5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:196-b5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:196-b5 (PCR_reagent)
Remark  3/3 tests show wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F36H12.8 Browse using GBrowse
Gene Graph
Gene Plot of R13H9.5 Browse using GBrowse
Gene Graph