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RNAi Experiment: Cenix:196-c5 Ace View of Cenix:196-c5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F36H12.9
Description of "F36H12.9"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:5257186..5257335)
Transcript overlap: 150 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 128
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.542
Wormbase (BLAST) RNAi primary
External "F36H12.9" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  R13H9.6
Description of "R13H9.6"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:5068316..5068465)
Transcript overlap: 150 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 108
Relative score: 0.844 (Best raw score= for Gene )
Specificity index: 0.458
Wormbase (BLAST) RNAi primary
External "R13H9.6" Links  Wormbase NCBI Phenobank 1 2
Cenix:196-c5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:196-c5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:196-c5 (PCR_reagent)
Remark  3/3 tests show wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F36H12.9 Browse using GBrowse
Gene Graph
Gene Plot of R13H9.6 Browse using GBrowse
Gene Graph