Link to F53B2.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to R11A8.2geneMap Link to R11A8.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:197-e5 Ace View of Cenix:197-e5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53B2.1
Description of "F53B2.1"  Associated GO Term : transferase activity, transferring hexosyl groups
KOG Annotation  G-patch nucleic acid binding protein
UDP-glucuronosyl and UDP-glucosyl transferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:12517127..12517270)
Transcript overlap: 144 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 73
Relative score: 0.716 (Best raw score= for Gene )
Specificity index: 0.417
Wormbase (BLAST) RNAi primary
External "F53B2.1" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  R11A8.2
Description of "R11A8.2"  Associated GO Term : nucleic acid binding
KOG Annotation  G-patch nucleic acid binding protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:10359924..10360067)
Transcript overlap: 144 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 102
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.583
Wormbase (BLAST) RNAi primary
External "R11A8.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:197-e5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:197-e5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:197-e5 (PCR_reagent)
Remark  3/3 tests show a wildtype result.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of R11A8.2 Browse using GBrowse
Gene Graph
Gene Plot of F53B2.1 Browse using GBrowse
Gene Graph