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RNAi Experiment: Cenix:198-d7 Ace View of Cenix:198-d7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C36A4.4
Description of "C36A4.4"  Associated GO Term : nucleotidyltransferase activity
KOG Annotation  UDP-N-acetylglucosamine pyrophosphorylase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:3842040..3842189)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 107
Relative score: 0.829 (Best raw score= for Gene )
Specificity index: 0.453
Wormbase (BLAST) RNAi primary
External "C36A4.4" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K06B9.2
Description of "K06B9.2"  Associated GO Term : nucleotidyltransferase activity
KOG Annotation  UDP-N-acetylglucosamine pyrophosphorylase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:4195167..4195316)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 129
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.547
Wormbase (BLAST) RNAi primary
External "K06B9.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:198-d7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Osmotic Integrity defective
External Movies 
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hosting these data.)
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Cenix:198-d7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:198-d7 (PCR_reagent)
Remark  early embryonic: Osmotic Integrity
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C36A4.4 Browse using GBrowse
Gene Graph
Gene Plot of K06B9.2 Browse using GBrowse
Gene Graph