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RNAi Experiment: Cenix:200-a1 Ace View of Cenix:200-a1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  AH6.5 (mex-6)
Description of "AH6.5"  mex-6 encodes a CCCH zinc-finger protein highly similar to MEX-5 that functions with MEX-5 to affect embryonic viability, establish soma germline asymmetry in embryos and establish PIE-1, MEX-1, and POS-1 asymmetry in embryos, and also affects formation of intestinal cells; MEX-6 and MEX-5 may act downstream of the PAR proteins.
KOG Annotation  CCCH-type Zn-finger protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:9524313..9524903)
Transcript overlap: 538 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 496
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "AH6.5" Links  Wormbase NCBI Phenobank 1
Cenix:200-a1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:200-a1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:200-a1 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of AH6.5 Browse using GBrowse
Gene Graph