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RNAi Experiment: Cenix:200-f12 Ace View of Cenix:200-f12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C06A1.3
Description of "C06A1.3"  Associated GO Term : hydrolase activity
KOG Annotation  Serine/threonine specific protein phosphatase PP1, catalytic subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:10572176..10573320)
Transcript overlap: 794 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 711
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.775
Wormbase (BLAST) RNAi primary
External "C06A1.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F58G1.3
Description of "F58G1.3"  Associated GO Term : hydrolase activity
KOG Annotation  Serine/threonine specific protein phosphatase PP1, catalytic subunit
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 207
Relative score: 0.291 (Best raw score= for Gene )
Specificity index: 0.225
Wormbase (BLAST) RNAi secondary
External "F58G1.3" Links  Wormbase NCBI Phenobank 1
Cenix:200-f12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:200-f12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:200-f12 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C06A1.3 Browse using GBrowse
Gene Graph
Gene Plot of F58G1.3 Browse using GBrowse
Gene Graph