RNAi Experiment: Cenix:204-d5 |
Ace View of Cenix:204-d5
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Genes Inhibited |
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Gene Inhibited |
F18A1.2 (lin-26) |
Description of "F18A1.2" |
lin-26 encodes a putative C2H2 zinc finger-containing protein required for proper differentiation of ectodermal and mesodermal epithelial cells; LIN-26 is expressed in many different cell types including the rectal rep cells, the somatic gonad, glial cells, and hypodermal cells; ectopic LIN-26 expression during embryogenesis induces epithelial-like cell fates suggesting that LIN-26 is sufficient for epithelial differentiation. |
Evidence for Inhibition |
ePCR |
Status: Best_ePCR (II:7682084..7683368)
Transcript overlap: 1065 nt |
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Sliding Window |
Raw score: 913
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.856 |
Wormbase (BLAST) |
RNAi primary |
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External "F18A1.2" Links |
1 2 3 |
Gene Inhibited |
F18A1.3 (lir-1) |
Description of "F18A1.3" |
LIR-1 has no obvious effect on development when ectopically expressed in embryos, despite having a primary sequence closely similar to that of LIN-26. |
Evidence for Inhibition |
ePCR |
Status: Top50_percentile_ePCR (II:7682084..7683368)
Transcript overlap: 584 nt |
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Sliding Window |
Raw score: 374
Relative score: 0.168 (Best raw score= for Gene )
Specificity index: 0.144 |
Wormbase (BLAST) |
RNAi primary |
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External "F18A1.3" Links |
1 2 3 |
Cenix:204-d5 Phenotypes |
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Phenotype |
WT
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Cenix:204-d5 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
Cenix:204-d5 (PCR_reagent) |
Remark |
3/3 tests are wild type. |
Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
Delivery Method |
Injection |
Date |
2005-3-24 |
Gene Plot of F18A1.2 |
Browse using GBrowse
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Gene Plot of F18A1.3 |
Browse using GBrowse
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