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RNAi Experiment: Cenix:205-b10 Ace View of Cenix:205-b10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K10B2.1 (lin-23)
Description of "K10B2.1"  lin-23 encodes an F-box- and WD-repeat-containing protein that is orthologous to Saccharomyces cerevisiae MET30 and human beta TRCP (OMIM:603482), both components of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; LIN-23 negatively regulates postembryonic cell divsions in all tissue types, and specifically, has been shown to function cell autonomously in the vulva to negatively regulate cell cycle progression and allow for cell cycle exit; LIN-23 is most highly expressed in the early embryo and adult germline.
KOG Annotation  Beta-TrCP (transducin repeats containing)/Slimb proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:6371945..6373071)
Transcript overlap: 945 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 882
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "K10B2.1" Links  Wormbase NCBI Phenobank 1
Cenix:205-b10 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:205-b10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:205-b10 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K10B2.1 Browse using GBrowse
Gene Graph