Link to T25D3.4Link to T25D3.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T25D3.4Link to T25D3.3RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:206-c10 Ace View of Cenix:206-c10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T25D3.3
Description of "T25D3.3"  This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
KOG Annotation  Cystathionine beta-synthase and related enzymes
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:152540..154141)
Transcript overlap: 638 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 575
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T25D3.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T25D3.4
Description of "T25D3.4"  Associated GO Term : transporter activity
KOG Annotation  Predicted transporter ADD1 (major facilitator superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 43 nt Explain types of evidence for RNAi inhibition
External "T25D3.4" Links  Wormbase NCBI Phenobank 1
Cenix:206-c10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:206-c10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:206-c10 (PCR_reagent)
Remark  3/3 tests are wild type.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T25D3.4 Browse using GBrowse
Gene Graph
Gene Plot of T25D3.3 Browse using GBrowse
Gene Graph