Link to F34D6.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: Cenix:208-h11 Ace View of Cenix:208-h11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F34D6.3 (sup-9)
Description of "F34D6.3"  sup-9 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; sup-9 was originally defined by gain-of-function mutations that result in defects in pharyngeal, body-wall, egg-laying, and enteric muscle activation; loss of sup-9 function via reversion or RNA-mediated interference (RNAi) does not result in any abnormalities suggesting that SUP-9 may function redundantly with other TWK channels; SUP-9 is expressed in neurons and muscle.
KOG Annotation  Tandem pore domain K+ channel TASK3/THIK-1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2684766..2687017)
Transcript overlap: 1013 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 845
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F34D6.3" Links  Wormbase NCBI Phenobank 1
Cenix:208-h11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:208-h11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:208-h11 (PCR_reagent)
Remark  3/3 tests are wildtype
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F34D6.3 Browse using GBrowse
Gene Graph