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RNAi Experiment: Cenix:209-b6 Ace View of Cenix:209-b6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T01E8.6
Description of "T01E8.6"  Associated GO Term : structural constituent of ribosome
KOG Annotation  Mitochondrial/chloroplast ribosomal protein S14/S29
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:10240009..10241702)
Transcript overlap: 494 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 431
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.876
Wormbase (BLAST) RNAi primary
External "T01E8.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  B0047.1 (bath-20)
Description of "B0047.1"  Associated GO Term : protein binding
Evidence for Inhibition 
Sliding Window Raw score: 61
Relative score: 0.142 (Best raw score= for Gene )
Specificity index: 0.124
External "B0047.1" Links  Wormbase NCBI Phenobank 1
Cenix:209-b6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:209-b6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:209-b6 (PCR_reagent)
Remark  early embryonic: Clear cut.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of B0047.1 Browse using GBrowse
Gene Graph
Gene Plot of T01E8.6 Browse using GBrowse
Gene Graph