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RNAi Experiment: Cenix:209-h10 Ace View of Cenix:209-h10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK970.3 (mdt-22)
KOG Annotation  Surfeit family protein 5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:10300081..10301866)
Transcript overlap: 501 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 396
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.668
Wormbase (BLAST) RNAi primary
External "ZK970.3" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  ZK970.2
Description of "ZK970.2"  Associated GO Term : endopeptidase Clp activity
KOG Annotation  ATP-dependent Clp protease, proteolytic subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (II:10300081..10301866)
Transcript overlap: 281 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 197
Relative score: 0.497 (Best raw score= for Gene )
Specificity index: 0.332
Wormbase (BLAST) RNAi primary
External "ZK970.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:209-h10 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:209-h10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:209-h10 (PCR_reagent)
Remark  early embryonic: No significant defects seen in any of the recordings.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK970.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK970.3 Browse using GBrowse
Gene Graph