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RNAi Experiment: Cenix:210-g11 Ace View of Cenix:210-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06D8.8 (rpn-9)
Description of "T06D8.8"  rpn-9 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that that affects body morphology, embryonic viability, locomotion, larval viability, fertility, and growth; interacts with RPN-11 in yeast two-hybrid assays.
KOG Annotation  26S proteasome regulatory complex, subunit RPN9/PSMD13
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:11237452..11238038)
Transcript overlap: 537 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 495
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T06D8.8" Links  Wormbase NCBI Phenobank 1
Cenix:210-g11 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
External Movies 
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Cenix:210-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:210-g11 (PCR_reagent)
Remark  early embryonic: Significant drop in the overall pace of events in 2 of the experiments.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T06D8.8 Browse using GBrowse
Gene Graph