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RNAi Experiment: Cenix:210-g5 Ace View of Cenix:210-g5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F59H5.1
Description of "F59H5.1"  F59H5.1 encodes an unfamiliar protein with a low-complexity N-terminal region and a C-terminal DUF545 motif (of unknown function, found solely in nematode proteins); F59H5.1 is expressed in neuronal head ganglia, intestinal cells, hypodermal cells, and coelomocytes, with strong expression in embryos; F59H5.1 has no obvious function or phenotype in RNAi assays, whether in a normal background or in goa-1(-) or goa-1(gf) mutant backgrounds.
Evidence for Inhibition 
ePCR Transcript overlap: 28 nt Explain types of evidence for RNAi inhibition
External "F59H5.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F40B1.1 (bath-13)
Description of "F40B1.1"  Associated GO Term : protein binding
Evidence for Inhibition 
Sliding Window Raw score: 152
Relative score: 0.19 (Best raw score= for Gene )
Specificity index: 0.159
Wormbase (BLAST) RNAi secondary
External "F40B1.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F59H5.3 (bath-12)
Evidence for Inhibition 
Sliding Window Raw score: 801
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.841
Wormbase (BLAST) RNAi primary
External "F59H5.3" Links  Wormbase NCBI Phenobank 1
Cenix:210-g5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:210-g5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:210-g5 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F40B1.1 Browse using GBrowse
Gene Graph
Gene Plot of F59H5.1 Browse using GBrowse
Gene Graph
Gene Plot of F59H5.3 Browse using GBrowse
Gene Graph