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RNAi Experiment: Cenix:211-e2 Ace View of Cenix:211-e2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F32A5.7 (lsm-4)
Description of "F32A5.7"  Associated GO Term : mRNA processing
KOG Annotation  Small nuclear ribonucleoprotein (snRNP)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:7252244..7252938)
Transcript overlap: 414 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 267
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.64
Wormbase (BLAST) RNAi primary
External "F32A5.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F32A5.1 (ada-2)
Description of "F32A5.1"  Associated GO Term : DNA binding
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (II:7252244..7252938)
Transcript overlap: 237 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 150
Relative score: 0.562 (Best raw score= for Gene )
Specificity index: 0.36
Wormbase (BLAST) RNAi primary
External "F32A5.1" Links  Wormbase NCBI Phenobank 1 2
Cenix:211-e2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:211-e2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:211-e2 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F32A5.7 Browse using GBrowse
Gene Graph
Gene Plot of F32A5.1 Browse using GBrowse
Gene Graph