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RNAi Experiment: Cenix:213-h12 Ace View of Cenix:213-h12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y38F2AL.4 (vha-3)
Description of "Y38F2AL.4"  vha-3 encodes a 16-kDa proteolipid of the vacuolar-type H+-ATPase (V-ATPase) not required for embryonic viability; VHA-3 is 100% identical to VHA-2 with respect to amino acid sequence; expressed predominantly in the gastrointestinal and hypodermal cells and also in the excretory cell.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:2315671..2315820)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 129
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y38F2AL.4" Links  Wormbase NCBI Phenobank 1
Cenix:213-h12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:213-h12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:213-h12 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y38F2AL.4 Browse using GBrowse
Gene Graph