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RNAi Experiment: Cenix:214-a7 Ace View of Cenix:214-a7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49A3A.5 (cyn-1)
Description of "Y49A3A.5"  cyp-1 encodes a functional cyclophilin that is predicted to be secreted; expression increases as worms progress from the L1 larval stage to the adult stage.
KOG Annotation  Cyclophilin type peptidyl-prolyl cis-trans isomerase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:14358678..14358826)
Transcript overlap: 149 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 128
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49A3A.5" Links  Wormbase NCBI Phenobank 1
Cenix:214-a7 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:214-a7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:214-a7 (PCR_reagent)
Remark  3/3 tests are wildtype
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y49A3A.5 Browse using GBrowse
Gene Graph