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RNAi Experiment: Cenix:217-e1 Ace View of Cenix:217-e1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C27C7.3 (nhr-74)
Description of "C27C7.3"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:11431419..11431568)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 129
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.547
Wormbase (BLAST) RNAi primary
External "C27C7.3" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  ZK1025.6 (nhr-244)
Description of "ZK1025.6"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:11454805..11454954)
Transcript overlap: 150 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 107
Relative score: 0.829 (Best raw score= for Gene )
Specificity index: 0.453
Wormbase (BLAST) RNAi primary
External "ZK1025.6" Links  Wormbase NCBI Phenobank 1 2
Cenix:217-e1 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:217-e1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:217-e1 (PCR_reagent)
Remark  3/3 tests are wildtype
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C27C7.3 Browse using GBrowse
Gene Graph
Gene Plot of ZK1025.6 Browse using GBrowse
Gene Graph