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RNAi Experiment: Cenix:219-c10 Ace View of Cenix:219-c10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F08F1.9
Description of "F08F1.9"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (X:8410290..8410403)
Transcript overlap: 114 nt
Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "F08F1.9" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F59H6.7 (cya-2)
Description of "F59H6.7"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:2023161..2023274)
Transcript overlap: 114 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 93
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F59H6.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  W05G11.2
Description of "W05G11.2"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:58041..58154)
Transcript overlap: 114 nt
Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "W05G11.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:219-c10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:219-c10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:219-c10 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of W05G11.2 Browse using GBrowse
Gene Graph
Gene Plot of F08F1.9 Browse using GBrowse
Gene Graph
Gene Plot of F59H6.7 Browse using GBrowse
Gene Graph