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RNAi Experiment: Cenix:22-g4 Ace View of Cenix:22-g4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C10H11.9 (let-502)
Description of "C10H11.9"  let-502 encodes Rho-binding Ser/Thr kinase orthologous to human myotonic dystrophy kinase (DM-kinase), and is required for early embryonic cleavages, embryonic elongation, migration of hypodermal P cells to a ventral position, normal spermathecal contraction, and fertility; LET-502 is required for hypodermal cells to properly change their shape, and is expressed in those cells, during embryonic elongation; let-502 mutations are suppressed by mel-11 mutations, and the pattern of LET-502 expression in the embryonic epidermis and the spermatheca is opposite to that of MEL-11, indicating that LET-502 and MEL-11 have opposing functions (presumably tissue contraction and relaxation); MEL-11 requires LET-502 (along with the nonmuscle myosin NMY-1) for proper localization.
KOG Annotation  Rho-associated, coiled-coil containing protein kinase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:4742414..4742971)
Transcript overlap: 510 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 468
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C10H11.9" Links  Wormbase NCBI Phenobank 1
Cenix:22-g4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Cortical Dynamics abnormal
External Movies 
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Cenix:22-g4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:22-g4 (PCR_reagent)
Remark  early embryonic: Cortical Dynamics
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C10H11.9 Browse using GBrowse
Gene Graph