Link to F39E9.5RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to D1081.1Link to M03D4.5Link to C18C4.4Link to F14H8.3Link to C17H12.7Link to T27C4.5Link to ZK682.1Link to F49F1.13Link to Y113G7A.7Link to R04B5.2Link to C52D10.4Link to F46F5.3geneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T27C4.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F49F1.13Link to D1081.1Link to F14H8.3Link to R04B5.2Link to C52D10.4Link to C18C4.4Link to Y113G7A.7Link to F46F5.3Link to M03D4.5Link to C17H12.7Link to ZK682.1Link to R04D3.11geneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F14H8.4RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:220-c10 Ace View of Cenix:220-c10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F39E9.5
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:3307934..3308058)
Transcript overlap: 125 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 82
Relative score: 0.788 (Best raw score= for Gene )
Specificity index: 0.12
External "F39E9.5" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  C17H12.7
Evidence for Inhibition 
Sliding Window Raw score: 82
Specificity index: 0.12
External "C17H12.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  T27C4.5
Evidence for Inhibition 
Sliding Window Raw score: 61
Relative score: 0.587 (Best raw score= for Gene )
Specificity index: 0.089
Wormbase (BLAST) RNAi primary
External "T27C4.5" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y113G7A.7
Evidence for Inhibition 
Sliding Window Raw score: 79
Specificity index: 0.116
External "Y113G7A.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F14H8.3
Evidence for Inhibition 
Sliding Window Raw score: 65
Relative score: 0.625 (Best raw score= for Gene )
Specificity index: 0.095
Wormbase (BLAST) RNAi primary
External "F14H8.3" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  C18C4.4
Evidence for Inhibition 
Sliding Window Raw score: 104
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.152
External "C18C4.4" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  M03D4.5
Evidence for Inhibition 
Sliding Window Raw score: 79
Relative score: 0.76 (Best raw score= for Gene )
Specificity index: 0.116
External "M03D4.5" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  R04B5.2
Evidence for Inhibition 
Sliding Window Raw score: 60
Relative score: 0.577 (Best raw score= for Gene )
Specificity index: 0.088
Wormbase (BLAST) RNAi primary
External "R04B5.2" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  D1081.1
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.673 (Best raw score= for Gene )
Specificity index: 0.103
External "D1081.1" Links  Wormbase NCBI Phenobank 1 2
Cenix:220-c10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:220-c10 Experiment Details Ace View
Laboratory  TH
Author  Sonnichsen B; Koski LB; Walsh A; Marschall P; Neumann B; Brehm M et al.
RNAi Reagent & Type  Cenix:220-c10 (PCR_reagent)
Remark  Wildtype results in all three tests.
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C17H12.7 Browse using GBrowse
Gene Graph
Gene Plot of Y113G7A.7 Browse using GBrowse
Gene Graph
Gene Plot of T27C4.5 Browse using GBrowse
Gene Graph
Gene Plot of F39E9.5 Browse using GBrowse
Gene Graph
Gene Plot of F14H8.3 Browse using GBrowse
Gene Graph
Gene Plot of C18C4.4 Browse using GBrowse
Gene Graph
Gene Plot of M03D4.5 Browse using GBrowse
Gene Graph
Gene Plot of R04B5.2 Browse using GBrowse
Gene Graph
Gene Plot of D1081.1 Browse using GBrowse
Gene Graph