Link to K08C9.7RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H06I04.4b.1Link to H06I04.4b.2Link to H06I04.4a.3Link to H06I04.4a.2Link to H06I04.4a.1geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K08C9.7Link to F34H10.1geneMap Link to F34H10.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H06I04.4a.3Link to H06I04.4a.1Link to H06I04.4b.2Link to H06I04.4a.2Link to H06I04.4b.1Link to Y105E8B.10geneMap
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RNAi Experiment: Cenix:221-c12 Ace View of Cenix:221-c12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08C9.7
KOG Annotation  Ubiquitin/40S ribosomal protein S27a fusion
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:11495755..11495875)
Transcript overlap: 121 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 100
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.413
Wormbase (BLAST) RNAi primary
External "K08C9.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y105E8B.10
Evidence for Inhibition 
Sliding Window Raw score: 78
Relative score: 0.78 (Best raw score= for Gene )
Specificity index: 0.322
Wormbase (BLAST) RNAi primary
External "Y105E8B.10" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F34H10.1
KOG Annotation  Ubiquitin/40S ribosomal protein S27a fusion
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.64 (Best raw score= for Gene )
Specificity index: 0.264
Wormbase (BLAST) RNAi primary
External "F34H10.1" Links  Wormbase NCBI Phenobank 1
Cenix:221-c12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:221-c12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:221-c12 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y105E8B.10 Browse using GBrowse
Gene Graph
Gene Plot of K08C9.7 Browse using GBrowse
Gene Graph
Gene Plot of F34H10.1 Browse using GBrowse
Gene Graph