Link to F54D8.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T09F5.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0513.8Link to F47D2.2Link to R13D7.5Link to Y45F3A.6Link to F54D8.5Link to Y75B8A.41geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0513.8Link to F47D2.2Link to T09F5.7Link to Y45F3A.6Link to F54D8.5Link to Y75B8A.41geneMap Link to B0513.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y45F10C.1geneMap
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RNAi Experiment: Cenix:222-g10 Ace View of Cenix:222-g10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54D8.5
Description of "F54D8.5"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:5091259..5091375)
Transcript overlap: 117 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 96
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.25
Wormbase (BLAST) RNAi primary
External "F54D8.5" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  T09F5.7
Description of "T09F5.7"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:15159786..15159902)
Transcript overlap: 117 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 96
Specificity index: 0.25
Wormbase (BLAST) RNAi primary
External "T09F5.7" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  R13D7.5
Evidence for Inhibition 
Sliding Window Raw score: 96
Specificity index: 0.25
Wormbase (BLAST) RNAi primary
External "R13D7.5" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  B0513.8
Evidence for Inhibition 
Sliding Window Raw score: 96
Specificity index: 0.25
Wormbase (BLAST) RNAi primary
External "B0513.8" Links  Wormbase NCBI Phenobank 1 2 3 4
Cenix:222-g10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:222-g10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:222-g10 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of B0513.8 Browse using GBrowse
Gene Graph
Gene Plot of R13D7.5 Browse using GBrowse
Gene Graph
Gene Plot of T09F5.7 Browse using GBrowse
Gene Graph
Gene Plot of F54D8.5 Browse using GBrowse
Gene Graph