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RNAi Experiment: Cenix:225-e9 Ace View of Cenix:225-e9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y119D3B.19
Description of "Y119D3B.19"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:1257970..1258092)
Transcript overlap: 123 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 102
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "Y119D3B.19" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  ZC47.7
Description of "ZC47.7"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:1266411..1266533)
Transcript overlap: 123 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 102
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "ZC47.7" Links  Wormbase NCBI Phenobank 1 2
Cenix:225-e9 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Cenix:225-e9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:225-e9 (PCR_reagent)
Remark  early embryonic: Clear-cut result.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y119D3B.19 Browse using GBrowse
Gene Graph
Gene Plot of ZC47.7 Browse using GBrowse
Gene Graph