| RNAi Experiment: Cenix:225-g10 |
Ace View of Cenix:225-g10
|
| Genes Inhibited |
 |
| Gene Inhibited |
F08G2.1 (his-44) |
| Description of "F08G2.1" |
his-44 encodes an H2B histone. |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (II:13826756..13826880)
Transcript overlap: 125 nt |
|
| Sliding Window |
Raw score: 125
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.401 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F08G2.1" Links |
   1 2 3 |
| Gene Inhibited |
ZK131.5 (his-11) |
| Description of "ZK131.5" |
his-11 encodes an H2B histone; by homology, HIS-11 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-11 is a replication-dependent histone locus that resides in the HIS3 cluster on chromosome II. |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (II:13821825..13821949)
Transcript overlap: 125 nt |
|
| Sliding Window |
Raw score: 83
Relative score: 0.664 (Best raw score= for Gene )
Specificity index: 0.266 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "ZK131.5" Links |
1 2 3 |
| Gene Inhibited |
ZK131.9 (his-15) |
| Description of "ZK131.9" |
his-15 encodes an H2B histone. |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (II:13818387..13818511)
Transcript overlap: 125 nt |
|
| Sliding Window |
Raw score: 104
Relative score: 0.832 (Best raw score= for Gene )
Specificity index: 0.333 |
|
| External "ZK131.9" Links |
1 2 3 |
| Cenix:225-g10 Phenotypes |
|
|
| Embryonic |
Emb Penetrance None reported |
| Phenotype |
Sister Chromatid Separation abnormal (Cross-eyed)
|
External Movies
(Please note that RNAiDB is not
hosting these data.) |
|
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| Cenix:225-g10 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:225-g10 (PCR_reagent) |
| Remark |
early embryonic: Sister Chromatid Separation (Cross-eyed) |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of F08G2.1 |
Browse using GBrowse
|
 |
| Gene Plot of ZK131.5 |
Browse using GBrowse
|
 |
| Gene Plot of ZK131.9 |
Browse using GBrowse
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