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RNAi Experiment: Cenix:232-b11 Ace View of Cenix:232-b11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y48G8AL.1
Description of "Y48G8AL.1"  The Y48G8AL.1 gene encodes a homolog of human E6-AP ubiquitin-protein ligase, (UBE3A; OMIM:601623) which when mutated leads to one form of Angelman syndrome (OMIM:105830).
KOG Annotation  E3 ubiquitin protein ligase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:1213812..1213986)
Transcript overlap: 170 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 150
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y48G8AL.1" Links  Wormbase NCBI Phenobank 1
Cenix:232-b11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:232-b11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:232-b11 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y48G8AL.1 Browse using GBrowse
Gene Graph