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RNAi Experiment: Cenix:233-e2 Ace View of Cenix:233-e2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y71H2AM.4
KOG Annotation  NADH:ubiquinone oxidoreductase, NDUFC2/B14.5B subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:2786491..2786665)
Transcript overlap: 175 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 154
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
External "Y71H2AM.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y71H2AM.5
Description of "Y71H2AM.5"  Associated GO Term : cytochrome-c oxidase activity
KOG Annotation  Cytochrome c oxidase, subunit VIb/COX12
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:2786491..2786665)
Transcript overlap: 175 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 154
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "Y71H2AM.5" Links  Wormbase NCBI Phenobank 1
Cenix:233-e2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:233-e2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:233-e2 (PCR_reagent)
Remark  early embryonic: Clear cut
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y71H2AM.5 Browse using GBrowse
Gene Graph
Gene Plot of Y71H2AM.4 Browse using GBrowse
Gene Graph