| RNAi Experiment: Cenix:236-a12 |
Ace View of Cenix:236-a12
|
| Genes Inhibited |
 |
| Gene Inhibited |
T10C6.13 (his-2) |
| Description of "T10C6.13" |
his-2 encodes an H3 histone; his-2 is contained within the histone gene cluster HIS1. |
| Evidence for Inhibition |
| ePCR |
Status: Unique_ePCR (V:16044459..16044572)
Transcript overlap: 114 nt |
|
| Sliding Window |
Raw score: 93
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.203 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "T10C6.13" Links |
   1 |
| Gene Inhibited |
F45F2.13 (his-6) |
| Description of "F45F2.13" |
his-6 encodes an H3 histone. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 92
Specificity index: 0.201 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F45F2.13" Links |
1 |
| Gene Inhibited |
F07B7.5 (his-49) |
| Description of "F07B7.5" |
his-49 encodes an H3 histone; by homology, HIS-49 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-49 is a replication-dependent histone locus that resides in a histone gene-rich region on chromosome V. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 92
Specificity index: 0.201 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F07B7.5" Links |
1 |
| Gene Inhibited |
K06C4.13 (his-27) |
| Description of "K06C4.13" |
his-27 encodes an H3 histone; by homology, HIS-27 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-27 is a replication-dependent histone locus that resides in the HIS4 cluster on chromosome V. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 92
Relative score: 0.989 (Best raw score= for Gene )
Specificity index: 0.201 |
|
| External "K06C4.13" Links |
1 |
| Gene Inhibited |
K06C4.5 (his-17) |
| Description of "K06C4.5" |
his-17 encodes an H3 histone; his-17 is contained within the histone gene cluster HIS4. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 89
Relative score: 0.957 (Best raw score= for Gene )
Specificity index: 0.194 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "K06C4.5" Links |
1 |
| Cenix:236-a12 Phenotypes |
|
|
| Embryonic |
Emb Penetrance None reported |
| Phenotype |
Sister Chromatid Separation abnormal (Cross-eyed)
|
External Movies
(Please note that RNAiDB is not
hosting these data.) |
|
|
| Cenix:236-a12 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:236-a12 (PCR_reagent) |
| Remark |
early embryonic: Sister Chromatid Separation (Cross-eyed) |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of T10C6.13 |
Browse using GBrowse
|
 |
| Gene Plot of F45F2.13 |
Browse using GBrowse
|
 |
| Gene Plot of F07B7.5 |
Browse using GBrowse
|
 |
| Gene Plot of K06C4.13 |
Browse using GBrowse
|
 |
| Gene Plot of K06C4.5 |
Browse using GBrowse
|
 |
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