Link to F20B4.2RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T16G12.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H11L12.1Link to C27C7.1geneMap
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RNAi Experiment: Cenix:241-h12 Ace View of Cenix:241-h12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F20B4.2
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:17704010..17704113)
Transcript overlap: 104 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 83
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.58
Wormbase (BLAST) RNAi primary
External "F20B4.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  ZK1025.1
Evidence for Inhibition 
Sliding Window Raw score: 59
Wormbase (BLAST) RNAi primary
External "ZK1025.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T16G12.3
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 60
Relative score: 0.723 (Best raw score= for Gene )
Specificity index: 0.42
Wormbase (BLAST) RNAi primary
External "T16G12.3" Links  Wormbase NCBI Phenobank 1
Cenix:241-h12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:241-h12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:241-h12 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK1025.1 Browse using GBrowse
Gene Graph
Gene Plot of F20B4.2 Browse using GBrowse
Gene Graph
Gene Plot of T16G12.3 Browse using GBrowse
Gene Graph