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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:242-c12 Ace View of Cenix:242-c12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C33E10.4
Evidence for Inhibition 
Sliding Window Raw score: 290
Relative score: 0.903 (Best raw score= for Gene )
Specificity index: 0.176
External "C33E10.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y53C12A.5
Evidence for Inhibition 
Sliding Window Raw score: 283
Relative score: 0.882 (Best raw score= for Gene )
Specificity index: 0.172
External "Y53C12A.5" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T07C12.4
Evidence for Inhibition 
Sliding Window Raw score: 267
Relative score: 0.832 (Best raw score= for Gene )
Specificity index: 0.162
External "T07C12.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  B0302.3
Description of "B0302.3"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 321
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.195
External "B0302.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F44G3.3
Evidence for Inhibition 
Sliding Window Raw score: 194
Relative score: 0.604 (Best raw score= for Gene )
Specificity index: 0.118
External "F44G3.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y105C5A.7
Evidence for Inhibition 
Sliding Window Raw score: 289
Relative score: 0.9 (Best raw score= for Gene )
Specificity index: 0.176
External "Y105C5A.7" Links  Wormbase NCBI Phenobank 1
Cenix:242-c12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:242-c12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:242-c12 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C33E10.4 Browse using GBrowse
Gene Graph
Gene Plot of Y53C12A.5 Browse using GBrowse
Gene Graph
Gene Plot of T07C12.4 Browse using GBrowse
Gene Graph
Gene Plot of Y105C5A.7 Browse using GBrowse
Gene Graph
Gene Plot of F44G3.3 Browse using GBrowse
Gene Graph
Gene Plot of B0302.3 Browse using GBrowse
Gene Graph