Link to C01G10.13RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C25D7.1Link to T05H4.8geneMap Link to F49E11.3Link to F49E11.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:242-c2 Ace View of Cenix:242-c2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C01G10.13
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:15108592..15109040)
Transcript overlap: 294 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 231
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.783
Wormbase (BLAST) RNAi primary
External "C01G10.13" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F49E11.3 (amt-2)
Description of "F49E11.3"  a homolog of ammonium transporter.
KOG Annotation  Ammonia permease
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.277 (Best raw score= for Gene )
Specificity index: 0.217
External "F49E11.3" Links  Wormbase NCBI Phenobank 1
Cenix:242-c2 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:242-c2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:242-c2 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C01G10.13 Browse using GBrowse
Gene Graph
Gene Plot of F49E11.3 Browse using GBrowse
Gene Graph