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RNAi Experiment: Cenix:242-f10 Ace View of Cenix:242-f10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y46H3A.2 (hsp-16.41)
Description of "Y46H3A.2"  hsp-16.41 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins; an hsp-16.41 reporter fusion, expressed broadly but strongest in intestine and pharynx, is induced in response to heat shock or other environmental stresses; expression is detectable in somatic tissues in post-gastrulation embryos, all larval stages, and in adults; HSP-16.41 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating.
KOG Annotation  Alpha crystallins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:1805095..1805538)
Transcript overlap: 382 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 319
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y46H3A.2" Links  Wormbase NCBI Phenobank 1
Cenix:242-f10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:242-f10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:242-f10 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y46H3A.2 Browse using GBrowse
Gene Graph