Link to C04C3.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C03B8.2Link to T07F10.5Link to ZK678.3Link to W02F12.1Link to T24A6.1geneMap Link to ZK678.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T24A6.1Link to C04C3.4Link to T07F10.5Link to C03B8.2Link to W02F12.1Link to W05G11.2geneMap Link to Y67D8A.2a.2Link to Y67D8A.2a.1Link to Y67D8A.1.2Link to Y67D8A.1.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to W05G11.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T07F10.2Link to T24A6.1Link to ZK678.3geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T07F10.2Link to T07F10.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W02A11.6Link to W05G11.2Link to F59H6.7Link to F08F1.9Link to C04C3.4Link to C03B8.2Link to ZK678.3Link to T24A6.1Link to F23H12.10Link to T07F10.2geneMap
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RNAi Experiment: Cenix:243-a6 Ace View of Cenix:243-a6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C04C3.4
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:3394205..3394499)
Transcript overlap: 107 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 86
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.164
Wormbase (BLAST) RNAi primary
External "C04C3.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  ZK678.3
Description of "ZK678.3"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.744 (Best raw score= for Gene )
Specificity index: 0.122
Wormbase (BLAST) RNAi primary
External "ZK678.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y67D8A.1
Description of "Y67D8A.1"  Y67D8A.1 is orthologous to the human gene PHOSPHORYLASE KINASE, BETA SUBUNIT (PHKB; OMIM:172490), which when mutated leads to glycogen storage disease.
KOG Annotation  Phosphorylase kinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 72
Relative score: 0.837 (Best raw score= for Gene )
Specificity index: 0.137
External "Y67D8A.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  W05G11.2
Description of "W05G11.2"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 83
Relative score: 0.965 (Best raw score= for Gene )
Specificity index: 0.158
Wormbase (BLAST) RNAi primary
External "W05G11.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F23H12.10
Evidence for Inhibition 
Sliding Window Raw score: 81
Relative score: 0.942 (Best raw score= for Gene )
Specificity index: 0.154
Wormbase (BLAST) RNAi primary
External "F23H12.10" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  W02A11.6
Evidence for Inhibition 
Sliding Window Raw score: 76
Relative score: 0.884 (Best raw score= for Gene )
Specificity index: 0.145
Wormbase (BLAST) RNAi primary
External "W02A11.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T07F10.5
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 63
Relative score: 0.733 (Best raw score= for Gene )
Specificity index: 0.12
Wormbase (BLAST) RNAi primary
External "T07F10.5" Links  Wormbase NCBI Phenobank 1
Cenix:243-a6 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:243-a6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:243-a6 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK678.3 Browse using GBrowse
Gene Graph
Gene Plot of W05G11.2 Browse using GBrowse
Gene Graph
Gene Plot of Y67D8A.1 Browse using GBrowse
Gene Graph
Gene Plot of F23H12.10 Browse using GBrowse
Gene Graph
Gene Plot of W02A11.6 Browse using GBrowse
Gene Graph
Gene Plot of C04C3.4 Browse using GBrowse
Gene Graph
Gene Plot of T07F10.5 Browse using GBrowse
Gene Graph