Link to C41G11.1aLink to C41G11.1bLink to C41G11.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F16H11.2RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y34B4A.2RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Cenix:27-b3 Ace View of Cenix:27-b3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C41G11.3 (rgs-6)
Description of "C41G11.3"  rgs-6 encodes a regulator of G protein signaling; by homology, RGS-6 is predicted to function as a GTPase-activating protein that binds G protein alpha subunits and negatively regulates heterotrimeric G protein signaling; loss of rgs-6 activity via RNAi or a deletion mutation results in no obvious defects, and likewise, rgs-6 overexpression has no measurable effect on egg-laying behavior, locomotion, or viability; the rgs-6 expression pattern has not yet been reported.
KOG Annotation  G protein signaling regulators
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:5726082..5726814)
Transcript overlap: 525 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 462
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.733
Wormbase (BLAST) RNAi primary
External "C41G11.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F16H11.2
Evidence for Inhibition 
Sliding Window Raw score: 96
Relative score: 0.208 (Best raw score= for Gene )
Specificity index: 0.152
External "F16H11.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y34B4A.2
KOG Annotation  UV radiation resistance associated protein
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 72
Relative score: 0.156 (Best raw score= for Gene )
Specificity index: 0.114
External "Y34B4A.2" Links  Wormbase NCBI Phenobank 1
Cenix:27-b3 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Help
Cenix:27-b3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:27-b3 (PCR_reagent)
Remark  early embryonic: No reproducible defects found.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F16H11.2 Browse using GBrowse
Gene Graph
Gene Plot of C41G11.3 Browse using GBrowse
Gene Graph
Gene Plot of Y34B4A.2 Browse using GBrowse
Gene Graph