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RNAi Experiment: Cenix:29-a11 Ace View of Cenix:29-a11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F40F9.9 (aqp-4)
Description of "F40F9.9"  Associated GO Term : transporter activity
KOG Annotation  Aquaporin (major intrinsic protein family)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:9744047..9744908)
Transcript overlap: 511 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 448
Specificity index: 0.5
External "F40F9.9" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F58E6.1
Description of "F58E6.1"  The F58E6.1 encodes a protein that may be involved in apoptosis.
KOG Annotation  Protein involved in mRNA turnover and stability
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:9744047..9744908)
Transcript overlap: 511 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 448
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "F58E6.1" Links  Wormbase NCBI Phenobank 1 2
Cenix:29-a11 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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hosting these data.)
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Cenix:29-a11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:29-a11 (PCR_reagent)
Remark  early embryonic: Overall wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F40F9.9 Browse using GBrowse
Gene Graph
Gene Plot of F58E6.1 Browse using GBrowse
Gene Graph