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RNAi Experiment: Cenix:29-d2 Ace View of Cenix:29-d2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53A10.2
Description of "F53A10.2"  F53A10.2 encodes a Rap1GAP homolog; a region of F53A10.2 encompassing one GoLoco motif specifically binds GOA-1 in yeast two-hybrid assays, and also binds itself; F53A10.2 is expressed in hypodermal seam cells, various neurons, and intestinal cells; F53A10.2 has no obvious function or phenotype in RNAi assays, whether in a normal background or in goa-1(-) or goa-1(gf) mutant backgrounds.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:1224328..1225318)
Transcript overlap: 519 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 477
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F53A10.2" Links  Wormbase NCBI Phenobank 1
Cenix:29-d2 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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Cenix:29-d2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:29-d2 (PCR_reagent)
Remark  early embryonic: Clear cut result.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F53A10.2 Browse using GBrowse
Gene Graph