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RNAi Experiment: Cenix:300-d2 Ace View of Cenix:300-d2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  H38K22.1 (evl-14)
Description of "H38K22.1"  evl-14 encodes a homolog of the yeast sister cohesion protein Pds5p that functions during both mitosis and meiosis and is implicated in the maintenance of sister chromatid cohesion in late prophase, and affects vulval morphology, meiotic germline development, embryonic and larval viability, fertility, and cell divisions in the germ line as well as in vulval and somatic gonad lineages; some of the defects, such as somatic gonad defects, are due at least partially to cell division defects.
KOG Annotation  Sister chromatid cohesion complex Cohesin, subunit PDS5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:4307315..4309360)
Transcript overlap: 923 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 818
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "H38K22.1" Links  Wormbase NCBI Phenobank 1
Cenix:300-d2 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:300-d2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:300-d2 (PCR_reagent)
Remark  early embryonic: Clear cut.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of H38K22.1 Browse using GBrowse
Gene Graph