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RNAi Experiment: Cenix:300-e7 Ace View of Cenix:300-e7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C28A5.6
Description of "C28A5.6"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:4423919..4426216)
Transcript overlap: 1397 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1250
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.815
Wormbase (BLAST) RNAi primary
External "C28A5.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  K09C6.1
Description of "K09C6.1"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 283
Relative score: 0.226 (Best raw score= for Gene )
Specificity index: 0.185
Wormbase (BLAST) RNAi primary
External "K09C6.1" Links  Wormbase NCBI Phenobank 1
Cenix:300-e7 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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Cenix:300-e7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:300-e7 (PCR_reagent)
Remark  early embryonic: no significant defects. 1/5 embryos is round in shape.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C28A5.6 Browse using GBrowse
Gene Graph
Gene Plot of K09C6.1 Browse using GBrowse
Gene Graph