Link to C27F2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F17C8.6Link to F17C8.5geneMap Link to F17C8.5Link to F17C8.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C27F2.6Link to C27F2.2geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:301-a5 Ace View of Cenix:301-a5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C27F2.2 (nca-2)
Description of "C27F2.2"  nca-2 encodes a four-domain, voltage-gated ion channel; NCA-2 is required for normal rates of movement and may function with NCA-1, another voltage-gated ion channel, to regulate locomotion; NCA-2 is expressed in the nerve ring, ventral cord motorneurons, and a subset of tail neurons.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:4978236..4979389)
Transcript overlap: 701 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 617
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.536
Wormbase (BLAST) RNAi primary
External "C27F2.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F17C8.6
KOG Annotation  Voltage-gated Ca2+ channels, alpha1 subunits
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 535
Relative score: 0.867 (Best raw score= for Gene )
Specificity index: 0.464
Wormbase (BLAST) RNAi primary
External "F17C8.6" Links  Wormbase NCBI Phenobank 1
Cenix:301-a5 Phenotypes Help with Phenotypes
Phenotype  Egg Size abnormal
WT_postembryonic_morphology
Cenix:301-a5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:301-a5 (PCR_reagent)
Remark  early embryonic: Egg Size
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C27F2.2 Browse using GBrowse
Gene Graph
Gene Plot of F17C8.6 Browse using GBrowse
Gene Graph