Link to F48E8.5.2Link to F48E8.5.1Link to F48E8.5.3Link to F48E8.5.4Link to F48E8.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: Cenix:301-g7 Ace View of Cenix:301-g7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F48E8.5 (paa-1)
Description of "F48E8.5"  paa-1 encodes a homolog of PR65, the structural subunit of protein phosphatase 2A (PP2A); PAA-1 protein is bound by SMG-5; PAA-1 is required in mass RNAi assays for embryonic viability, fertility, and cuticular integrity.
KOG Annotation  Protein phosphatase 2A regulatory subunit A and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5450954..5452617)
Transcript overlap: 1469 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1364
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F48E8.5" Links  Wormbase NCBI Phenobank 1
Cenix:301-g7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Entry Into Interphase abnormal
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Cenix:301-g7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:301-g7 (PCR_reagent)
Remark  early embryonic: Entry Into Interphase
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F48E8.5 Browse using GBrowse
Gene Graph