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RNAi Experiment: Cenix:301-h6 Ace View of Cenix:301-h6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C34E10.2 (gop-2)
Description of "C34E10.2"  gop-2 encodes a member of the conserved hypothetical ATP binding protein family that affects embryonic viability, growth, and fertility.
KOG Annotation  GTPase XAB1, interacts with DNA repair protein XPA
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5258816..5260148)
Transcript overlap: 917 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 854
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C34E10.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C34E10.3 (gop-1)
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 64 nt Explain types of evidence for RNAi inhibition
External "C34E10.3" Links  Wormbase NCBI Phenobank 1
Cenix:301-h6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:301-h6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:301-h6 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C34E10.2 Browse using GBrowse
Gene Graph
Gene Plot of C34E10.3 Browse using GBrowse
Gene Graph