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RNAi Experiment: Cenix:304-h11 Ace View of Cenix:304-h11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F11H8.3 (col-8)
Description of "F11H8.3"  col-8 encodes a collagen, individually dispensable for viability and gross morphology, which is specifically expressed in dauers and adults but not in eggs or L4 larvae, like col-7, col-18, and col-19; the amino- and carboxyl-terminal cysteine-rich regions of COL-8 are most closely related to those of COL-19, COL-35, and COL-39.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:7019502..7020960)
Transcript overlap: 910 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 847
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F11H8.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F11H8.2
Description of "F11H8.2"  Associated GO Term : GABA-A receptor activity
KOG Annotation  GABA receptor
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 3 nt Explain types of evidence for RNAi inhibition
External "F11H8.2" Links  Wormbase NCBI Phenobank 1
Cenix:304-h11 Phenotypes Help with Phenotypes
External Movies 
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Cenix:304-h11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:304-h11 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F11H8.2 Browse using GBrowse
Gene Graph
Gene Plot of F11H8.3 Browse using GBrowse
Gene Graph