Link to F59B2.6Link to F59B2.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C26E6.11RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F37D6.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:308-b3 Ace View of Cenix:308-b3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F59B2.7 (rab-6.1)
Description of "F59B2.7"  Associated GO Term : GTP binding
KOG Annotation  GTPase Rab6/YPT6/Ryh1, small G protein superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9004754..9006548)
Transcript overlap: 805 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 658
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.709
Wormbase (BLAST) RNAi primary
External "F59B2.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C26E6.11 (tag-339)
Evidence for Inhibition 
Sliding Window Raw score: 193
Relative score: 0.293 (Best raw score= for Gene )
Specificity index: 0.208
Wormbase (BLAST) RNAi primary
External "C26E6.11" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F37D6.1 (mus-101)
Description of "F37D6.1"  Associated GO Term : intracellular
KOG Annotation  Nucleotide excision repair factor NEF2, RAD4/CUT5 component
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.117 (Best raw score= for Gene )
Specificity index: 0.083
Wormbase (BLAST) RNAi primary
External "F37D6.1" Links  Wormbase NCBI Phenobank 1
Cenix:308-b3 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Help
Cenix:308-b3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:308-b3 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C26E6.11 Browse using GBrowse
Gene Graph
Gene Plot of F59B2.7 Browse using GBrowse
Gene Graph
Gene Plot of F37D6.1 Browse using GBrowse
Gene Graph