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RNAi Experiment: Cenix:31-f9 Ace View of Cenix:31-f9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F42E11.4 (tni-1)
Description of "F42E11.4"  tni-1 encodes a member of the troponin family that affects body morphology, locomotion, egg laying, and epithelial morphogenesis in a large-scale RNAi analysis.
KOG Annotation  Troponin I
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:11375912..11377545)
Transcript overlap: 938 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 812
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.675
Wormbase (BLAST) RNAi primary
External "F42E11.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T20B3.2 (tni-3)
KOG Annotation  Troponin I
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 296
Relative score: 0.481 (Best raw score= for Gene )
Specificity index: 0.325
External "T20B3.2" Links  Wormbase NCBI Phenobank 1
Cenix:31-f9 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:31-f9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:31-f9 (PCR_reagent)
Remark  early embryonic: Clear cut result.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T20B3.2 Browse using GBrowse
Gene Graph
Gene Plot of F42E11.4 Browse using GBrowse
Gene Graph